RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

tnaC.tnaA.IGT - spf interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tnaC.tnaA.IGT spf IGT sRNA chr + 3888580 3888677 chr + 4049925 4050009 435 5.6
tnaC.tnaA.IGT spf IGT sRNA chr + 3888409 3888575 chr + 4049923 4050008 160 2.3

tnaC.tnaA.IGT reads

spf reads