RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ycaC - arcZ interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ycaC arcZ CDS sRNA chr - 945227 945617 chr + 3350670 3350698 575 22.0
arcZ ycaC sRNA CDS chr + 3350641 3350656 chr - 945397 945517 81 8.0

ycaC reads

arcZ reads