RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

raiA.5UTR - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
raiA.5UTR gcvB 5UTR sRNA chr + 2737122 2737178 chr + 2942879 2942902 495 1.5
gcvB raiA.5UTR sRNA 5UTR chr + 2942780 2942861 chr + 2737140 2737178 577 5.3

raiA.5UTR reads

gcvB reads