RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cspD.5UTR - mgrR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
mgrR cspD.5UTR sRNA 5UTR chr - 1622857 1622915 chr - 922512 922633 40 4.0
cspD.5UTR mgrR 5UTR sRNA chr - 922345 922677 chr - 1622817 1622893 554 18.4

cspD.5UTR reads

mgrR reads