RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

uhpT.EST3UTR - flgN interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
flgN uhpT.EST3UTR CDS 3UTR chr - 1129683 1129777 chr - 3845731 3845776 243 12.5
flgN uhpT.EST3UTR CDS 3UTR chr - 1129214 1129675 chr - 3845731 3845751 40 3.9

uhpT.EST3UTR reads

flgN reads