RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

uhpT.EST3UTR - tnaB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tnaB uhpT.EST3UTR CDS 3UTR chr + 3890401 3890761 chr - 3845731 3845771 75 2.5
tnaB uhpT.EST3UTR CDS 3UTR chr + 3891014 3891158 chr - 3845731 3845750 25 6.0

uhpT.EST3UTR reads

tnaB reads