RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

uhpT.EST3UTR - tnaA interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tnaA uhpT.EST3UTR CDS 3UTR chr + 3889278 3889475 chr - 3845731 3845769 183 11.4
tnaA uhpT.EST3UTR CDS 3UTR chr + 3888999 3889064 chr - 3845731 3845775 36 5.7

uhpT.EST3UTR reads

tnaA reads