RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rhlB - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rhlB gcvB CDS sRNA chr - 3965485 3965663 chr + 2942719 2942867 127 2.2
rhlB gcvB CDS sRNA chr - 3964878 3964971 chr + 2942880 2942901 68 2.6
gcvB rhlB sRNA CDS chr + 2942695 2942772 chr - 3965581 3965620 59 9.3

rhlB reads

gcvB reads