RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rbsD - arcZ interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rbsD arcZ CDS sRNA chr + 3933308 3933767 chr + 3350608 3350699 7769 38.6
arcZ rbsD sRNA CDS chr + 3350575 3350666 chr + 3933593 3933674 56 3.1

rbsD reads

arcZ reads