RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rbsD - arcZ interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rbsD arcZ CDS sRNA chr + 3933308 3933751 chr + 3350611 3350723 10505 74.5
arcZ rbsD sRNA CDS chr + 3350585 3350667 chr + 3933592 3933677 53 2.7

rbsD reads

arcZ reads