RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ptsG.5UTR - sgrS interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
sgrS ptsG.5UTR sRNA 5UTR chr + 77366 77555 chr + 1157836 1157872 106 345.4
ptsG.5UTR sgrS 5UTR sRNA chr + 1157765 1158010 chr + 77397 77594 196 196.0

ptsG.5UTR reads

sgrS reads