RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ompC.5UTR - ydfC.dicF.IGR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ydfC.dicF.IGR ompC.5UTR IGR 5UTR chr + 1649250 1649354 chr - 2312735 2312789 77 13.2
ompC.5UTR ydfC.dicF.IGR 5UTR IGR chr - 2312780 2312830 chr + 1649282 1649440 58 3.6

ompC.5UTR reads

ydfC.dicF.IGR reads