RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ompC - glmZ interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompC glmZ CDS sRNA chr - 2312613 2312678 chr + 3986457 3986551 29 3.6
ompC glmZ CDS sRNA chr - 2312688 2312756 chr + 3986459 3986475 10 21.4

ompC reads

glmZ reads