RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ompA.5UTR - micA interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompA.5UTR micA 5UTR sRNA chr - 1019788 1020195 chr + 2814824 2814881 5563 41.1
micA ompA.5UTR sRNA 5UTR chr + 2814797 2814838 chr - 1019980 1020069 439 7.8

ompA.5UTR reads

micA reads