RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ompA.5UTR - micA interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompA.5UTR micA 5UTR sRNA chr - 1020078 1020188 chr + 2814824 2814878 872 5.2
micA ompA.5UTR sRNA 5UTR chr + 2814801 2814857 chr - 1019978 1020067 357 5.3

ompA.5UTR reads

micA reads