RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

nhaA - cyaR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nhaA cyaR CDS sRNA chr + 18401 18600 chr + 2167135 2167200 533 11.1
nhaA cyaR CDS sRNA chr + 18310 18400 chr + 2167159 2167200 102 2.8
nhaA cyaR CDS sRNA chr + 18602 18699 chr + 2167149 2167200 95 3.1
cyaR nhaA sRNA CDS chr + 2167112 2167170 chr + 18501 18700 134 2.4

nhaA reads

cyaR reads