RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mdh - spf interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
spf mdh sRNA CDS chr + 4049898 4049968 chr - 3384081 3384171 48 9.5
mdh spf CDS sRNA chr - 3384086 3384271 chr + 4049925 4049971 55 20.6

mdh reads

spf reads