RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mcrB - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
mcrB gcvB CDS sRNA chr - 4579287 4579354 chr + 2942719 2942870 119 4.2
gcvB mcrB sRNA CDS chr + 2942695 2942778 chr - 4579193 4579311 52 2.6

mcrB reads

gcvB reads