RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

malG - ompC interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompC malG CDS CDS chr - 2311911 2312278 chr - 4242578 4242761 67 11.9
malG ompC CDS CDS chr - 4242601 4242958 chr - 2312395 2312809 71 2.8

malG reads

ompC reads