RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

lpp.5UTR - raiA interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
raiA lpp.5UTR CDS 5UTR chr + 2737383 2737494 chr + 1757410 1757468 32 6.0
lpp.5UTR raiA 5UTR CDS chr + 1757379 1757474 chr + 2737406 2737543 101 3.4

lpp.5UTR reads

raiA reads