RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

lpp - gadE.mdtE.IGT interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
lpp gadE.mdtE.IGT CDS IGT chr + 1757383 1757474 chr + 3659043 3659082 144 14.1
lpp gadE.mdtE.IGT CDS IGT chr + 1757487 1757645 chr + 3658995 3659082 44 2.8

lpp reads

gadE.mdtE.IGT reads