RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

livK.5UTR - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
livK.5UTR gcvB 5UTR sRNA chr - 3597588 3597653 chr + 2942717 2942774 31 16.9
gcvB livK.5UTR sRNA 5UTR chr + 2942696 2942768 chr - 3597486 3597576 42 13.4

livK.5UTR reads

gcvB reads