RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rsmA - arcZ interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rsmA arcZ CDS sRNA chr - 52401 52655 chr + 3350671 3350697 49 5.8
arcZ rsmA sRNA CDS chr + 3350614 3350657 chr - 52372 52482 29 6.7

rsmA reads

arcZ reads