RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

hupB - micA interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
micA hupB sRNA CDS chr + 2814800 2814850 chr + 461378 461785 1333 7.8
hupB micA CDS sRNA chr + 461328 461754 chr + 2814757 2814879 4161 16.4

hupB reads

micA reads