RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

hupB - micA interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
micA hupB sRNA CDS chr + 2814801 2814843 chr + 461478 461675 289 1.5
hupB micA CDS sRNA chr + 461314 461744 chr + 2814822 2814878 931 1.7

hupB reads

micA reads