RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

glpK - arcZ interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
glpK arcZ CDS sRNA chr - 4117187 4117276 chr + 3350662 3350698 307 8.6
glpK arcZ CDS sRNA chr - 4117080 4117177 chr + 3350610 3350699 70 2.4

glpK reads

arcZ reads