RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fadA.fre.IGR - ompC interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompC fadA.fre.IGR CDS IGR chr - 2312684 2312829 chr - 4027234 4027252 32 30.3
ompC fadA.fre.IGR CDS IGR chr - 2312183 2312313 chr - 4027233 4027236 10 14.9

fadA.fre.IGR reads

ompC reads