RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

dfp - gcvB interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB dfp sRNA CDS chr + 2942695 2942778 chr + 3813787 3813867 48 5.7
dfp gcvB CDS sRNA chr + 3813731 3813876 chr + 2942721 2942776 36 4.4

dfp reads

gcvB reads