RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

hokE.ybdK.IGR

Flanking gene IDs:

  • G0-9582
  • G6326

Summary:

Name ID Genomic annotation Chromosome Strand
hokE.ybdK.IGR G0-9582.G6326.IGR IGR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 10 1.00 0.00 3
Stat. Phase (Melamed et al. 2016) 1 54 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase
ribB CDS Show interaction
yjbJ CDS Show interaction