RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

dsrA - hns interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
hns dsrA CDS sRNA chr - 1292690 1292960 chr - 2025222 2025285 421 15.3
dsrA hns sRNA CDS chr - 2025262 2025313 chr - 1292880 1292933 164 123.3
dsrA hns sRNA CDS chr - 2025262 2025313 chr - 1292796 1292876 35 7.5

dsrA reads

hns reads