RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

insH-1 - G0-10697 interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
insH-1 G0-10697 CDS ncRNA chr - 273980 274273 chr + 1300717 1300971 130 398.6
G0-10697 insH-1 ncRNA CDS chr + 1299439 1301020 chr - 274717 275126 960 64.9
G0-10697 insH-1 ncRNA CDS chr + 1299469 1299472 chr - 274508 274646 10 64.7
G0-10697 insH-1 ncRNA CDS chr + 1299470 1300976 chr - 273979 274463 48 18.2

insH-1 reads

G0-10697 reads