RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

insH-1 - G0-10697 interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
insH-1 G0-10697 CDS ncRNA chr - 273976 274269 chr + 1300716 1300976 129 184.5
G0-10697 insH-1 ncRNA CDS chr + 1299411 1300846 chr - 274710 275126 157 476.4
G0-10697 insH-1 ncRNA CDS chr + 1299470 1300971 chr - 273957 274265 86 43.5

insH-1 reads

G0-10697 reads