RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

rybB - tsx.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tsx.5UTR rybB 5UTR sRNA chr - 432013 432091 chr - 887976 888065 47 8.8
rybB tsx.5UTR sRNA 5UTR chr - 888017 888059 chr - 432005 432052 78 28.9

rybB reads

tsx.5UTR reads