RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

G0-10697 - insH-1 interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
insH-1 G0-10697 CDS ncRNA chr - 273980 274273 chr + 1300717 1300974 140 284.6
G0-10697 insH-1 ncRNA CDS chr + 1299395 1301026 chr - 274677 275126 495 102.9
G0-10697 insH-1 ncRNA CDS chr + 1299470 1301031 chr - 273995 274273 83 28.7

G0-10697 reads

insH-1 reads