RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

oxyS - mepS.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
oxyS mepS.5UTR sRNA 5UTR chr - 4158322 4158396 chr + 2269935 2269978 10 89.3
mepS.5UTR oxyS 5UTR sRNA chr + 2269908 2269952 chr - 4158279 4158351 55 148.7

oxyS reads

mepS.5UTR reads