RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

micF - ompF interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompF micF CDS sRNA chr - 986680 987093 chr + 2313106 2313196 6085 87.0
micF ompF sRNA CDS chr + 2313082 2313131 chr - 986878 986977 212 8.8

micF reads

ompF reads