RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

micF - ompF interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ompF micF CDS sRNA chr - 986682 987093 chr + 2313118 2313182 1517 41.3
micF ompF sRNA CDS chr + 2313084 2313125 chr - 986924 986974 44 3.3

micF reads

ompF reads