RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cfa.5UTR - rydC interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
cfa.5UTR rydC 5UTR sRNA chr + 1741278 1741376 chr - 1491442 1491466 69 32.8
cfa.5UTR rydC 5UTR sRNA chr + 1741200 1741274 chr - 1491442 1491476 29 3.8

cfa.5UTR reads

rydC reads