RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

tnaC.tnaA.IGT - ompF interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
tnaC.tnaA.IGT ompF IGT CDS chr + 3888485 3888538 chr - 986781 986877 30 4.3
ompF tnaC.tnaA.IGT CDS IGT chr - 986879 986968 chr + 3888473 3888576 39 4.9

tnaC.tnaA.IGT reads

ompF reads