RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ompC.5UTR - rybB interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rybB ompC.5UTR sRNA 5UTR chr - 888000 888059 chr - 2312779 2312805 67 7.2
ompC.5UTR rybB 5UTR sRNA chr - 2312798 2312865 chr - 887976 887977 79 2.3

ompC.5UTR reads

rybB reads