RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

nagE.5UTR - cof interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nagE.5UTR cof 5UTR CDS chr + 703825 703964 chr + 468199 468271 201 114.1
cof nagE.5UTR CDS 5UTR chr + 468114 468209 chr + 703896 703956 29 45.8

nagE.5UTR reads

cof reads