RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

nagE.5UTR - cof interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nagE.5UTR cof 5UTR CDS chr + 703839 703965 chr + 468177 468271 86 43.5
cof nagE.5UTR CDS 5UTR chr + 467991 468201 chr + 703885 703954 11 16.0

nagE.5UTR reads

cof reads