RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

nagE.5UTR - nanT.nanA.IGT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nanT.nanA.IGT nagE.5UTR IGT 5UTR chr - 3372618 3372951 chr + 703876 703941 14 14.4
nagE.5UTR nanT.nanA.IGT 5UTR IGT chr + 703785 703874 chr - 3372617 3372666 53 117.3

nagE.5UTR reads

nanT.nanA.IGT reads