RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

manX - sgrS interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
sgrS manX sRNA CDS chr + 77366 77551 chr + 1902018 1902248 51 52.4
manX sgrS CDS sRNA chr + 1901984 1902466 chr + 77391 77594 588 459.7

manX reads

sgrS reads