RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvH - rbsD interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
rbsD gcvH CDS CDS chr + 3933391 3933619 chr - 3049501 3049577 26 4.3
gcvH rbsD CDS CDS chr - 3049534 3049606 chr + 3933345 3933643 80 9.5

gcvH reads

rbsD reads