RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fecR - fecA interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
fecR fecA CDS CDS chr - 4517412 4517674 chr - 4516179 4516567 29 5.3
fecA fecR CDS CDS chr - 4516285 4516660 chr - 4517500 4517672 32 7.6
fecA fecR CDS CDS chr - 4515406 4515859 chr - 4517354 4517770 20 5.5

fecR reads

fecA reads