RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

aceA - ymfL.AS interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ymfL.AS aceA AS CDS chr - 1203776 1203821 chr + 4217571 4217937 22 12.8
aceA ymfL.AS CDS AS chr + 4217290 4217773 chr - 1203750 1203768 35 20.6
aceA ymfL.AS CDS AS chr + 4217904 4218367 chr - 1203751 1203757 13 9.6

aceA reads

ymfL.AS reads